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The second largest concentration of common terns (Sterna hirundo) in North America is found on Tern Islands, a set of three small barrier islands separated by water at high tide located within Kouchibouguac National Park. These seabirds are indicators for the condition of coastal, marine, as well as estuarine ecosystems due to the use of these nesting and/or breeding grounds, and their reliance on the distribution of small fish populations in lagoons or along the outer beaches of barrier islands throughout the breeding season. The purpose of the common tern colony monitoring program is to determine the annual total number of nests and estimate mean clutch size in order to evaluate long-term breeding population health. The methods for this measure involve an annual systematic census on Tern Islands over a 1-2 day period in mid-to late June during the late incubation stage.

Monitoring of the number of eggs and nests for the tern. Field data from 1992 to 2019. Many islands in the MANPRC are used by the terns for their nesting. The presence and great abundance of this species are characteristic of the inland ecology of the park.

Terra Nova National Park censuses tern nests on 23 small islands in Newman Sound, to monitor species productivity and population dynamics.

The piping plover (Charadrius melodus) is a small endangered shorebird listed under the federal Species at Risk Act (SARA). This species uses ocean shorelines as breeding grounds and nests in soft sandy areas with sparse vegetation above the high tide water line. These birds are indicators for the condition of coastal ecosystems due to their critical status; but also since this species is susceptible to human disturbance, habitat loss or alterations, predation, and sensitive to inclement weather related to sea level rise or climate change. The extensive barrier islands within Kouchibouguac National Park host a considerable percentage of the population along the Atlantic Coast therefore our role is crucial in the outcome of this species on a continental scale.

Monitoring of the number of eggs and nests for the common eider. Field data between 1988 to 2015. Many islands in the MANPRC are used by the common eider for nesting. The presence and great abundance of this species are characteristic of the inland ecology of the park.

These fish-eating colonial waterbirds breed and nest in colonies on islands in and around Fathom Five National Marine Park. Five species of colonial waterbird are monitored. These birds and their eggs are effective measures of environmental contamination and aquatic ecosystem health.

Field data from the monitoring of the common eider. The number of eggs and nests of the common eider were surveyed between 1988 and 2005. Many islands of the MANPRC are used by the common eider for nesting. The presence and great abundance of this species are characteristic of the inland ecology of the park.

The Grasslands National Park monitors the nesting attempts and productivity of burrowing owls by measuring the number of nests, number of owlets, and occupancy rate.

Monitoring of the number of eggs and nests for the Great black-backed and European herring gulls . Field data from 1996 to 2015. Many islands in the MANPRC are used by the Great black-backed and European herring gulls for nesting. The presence of this species is characteristic of the inland ecology of the park.

The abundance of bank swallow (Riparia riparia) nest holes within cliff and bank habitats along PEI National Park coastline is monitored. Previously, large historical colonies were surveyed annually, and every five years a complete census of the entire park shoreline was completed. As of 2010, a complete census is done annually along the coastline of PEI National Park following the breeding season. Nest holes are counted along the coast throughout PEI National Park by multiple observers.